Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015905824.1_cds_XP_016456090.1_49958
CDS Infomation

[gene=LOC107780082] [db_xref=GeneID:107780082] [protein=uncharacterized protein LOC107780082 isoform X3] [protein_id=XP_016456090.1] [location=join(38552..38929,47184..47373,47513..48564,53385..53411,61221..61299,61559..61649,64410..64518,64626..64742,64829..64870)] [gbkey=CDS]
Sequence

ATGGCCTTGGCAGAAGCAGTTAAAGTAGAGCCTTCAGCGGACCTAGAAAATGACGAGGAA
GTTAACTTTGTCTGGGGTAGAAAGAGAGGTATTGGTGGTAAGAGGAAGGAGGTTCAGTTT
TATGAATCTTTTACCTATGATGATGTGGAGTATGCTCTATATGATTGTGTATACATGCAC
AAGGAAGGTCAACTTCCTTACATTGGTAAAATCATAAAGATATGGGAAAACCCAGATAAG
TCCAGGAAGATAAAGGTACACTGGTTTTTCCGGCTATCGGAGATCTTGTATCACCTGAAA
GGTGTAAAAGTGGCAGCTGAGAATGAAATATTTCTTGCCTCAGGTGAAGGCACTGGTTTG
GCTAATGTTAATCCATTGGAAGCTATTGCCGGCAAATGCAATGTTGTCTGCATTTCAGAG
GACAACAGAAATCCACAACCATCAGAGGAAGAAGTTAAAACGGCTGACTTTGTTTTCTAC
CGTGCTTTTGATGTTGGAAAATGTTCAATATTGGATAAGATGGATGACAAAGTTGGTGGG
CTGGATGGTATGTGCCTCAGCTCCCTGGTCAAGTATGTTTTTAACAGGAAGGAGAGTCAA
AAGGCCAGTCACGTCCTCAAACATGCTTCTGACCAGAACGGTGATAACAATGCTGTGGAA
TTCCAAGCTACTACTAAAGAGTCCTTTGGGCTAAAGGCACTAAATGATCTTGGAACTTTC
AAAGCGAGTCATTTAGATGGAAAAATTGATGTGGATGCACAAAGTTCTCTGGTTAGACAG
GACGCTTTACAGAGAGAAACAAATGTTTCACGTGTTAATAAGGAAACAACTAAGAAAGCG
AATTCTGCCTCTGGTGAGCAAAACTCACATGATGTTTCGCGAGTTGCCAAAGCTGCTGGA
AAATTGAGCCATATAGTGGGAAAAAGTGATGTAAATGTGCAAACTTCACCGGTTAGACAG
GACCCCTTACATGGAGATGCAAATGATTCTCGCGTTAAGCAGCAATCAGCAATGAAAGGA
AATCCTGCTCCTGTGCAGATTGTTAACAGCACAACCACTACAGTTGTTCACAAGCAAAAT
ACTATTAGTGAAGAAAATGCACGCTGCAAAACTAAGAATGAAAAGGATGATAAAAAAGTT
AATAAGCCTCCAATCAATCTGGTGGAAGCTGGTGAAACAGGAAAATCTCCGAAGGATCTT
GGCGTTTTGGACGGTAGGCCTTCAAATCGAATAAAAGTCAATGATTCTGTGATTTTATCA
GAGGACAAGGGTGTGAACAGTGTAGAGAAGTCCACCGTTTGCAGAAATGAAAAAAAGGTT
TTGGGAACAAGTGCTGTTCCTTCTGAAGAAAGAAAGAAATCTGTAGATAGTAAAGATAGT
GCAGGTGGACTGGACAAGAACATGAAGATCAGAAAAGATAGTGCTGCCTTGGATAGCAGA
CCTTCGAAGAAAGCAAACATTGACGCTCGTAAAGTACAAGAGGATAGAGATAAAAGTAAC
ATGTTAGGTAAACGTGCTGATAATTTAGGCAAGTTGCCTAAATTATCAACGGGAACGTCC
CCCAAGGAAGTTGAGAGAACGGAAGGCAAGAGCTTCGAAGTCACTCGGAGACCCGTTGCC
GAGTCAAGCAAGTGGTTTAAGGCACCTGATATTATCTGGCATGCATGTAGAGAAAACTGC
ACAACCAAAATGGTCCAGCGCACTGCTTTCTCTAGCCCTTACTCTGGTAGAGCTTTAGTT
GCATTCAAAACAAGAGGAGTAGCAGAAAGGGTTACTAAAAAGTTGGCCGATGGATGCCTA
ATGGTGTCAAATCAGAGGCCGCTCGTTGCAAGCTTTGTATCTCTTCCTAAAACGGAAGGA
AACGCTTCATCATTAGCTGGGCATTTATGTGTTGACAAACTAAGACTACAACTGCAGCGG
GAAATGAGAGAAGCAGTGTCTACTTCTCATTGTTCTCAGCCCAACACTATTGAGTATGAA
ATGGCCAATGAGTGGCGCTTATTGCAAGCAAGATCTGACAGCTGGTGGAATCGGTTATAT
AAGCAACAAAAGGAGGACCTAACAAAAATCGCGTCAGGACTCTGA

Peptide Sequence

PEP ID

XP_016456090.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107780082 isoform X3 [Nicotiana tabacum]
Sequence

MALAEAVKVEPSADLENDEEVNFVWGRKRGIGGKRKEVQFYESFTYDDVEYALYDCVYMH
KEGQLPYIGKIIKIWENPDKSRKIKVHWFFRLSEILYHLKGVKVAAENEIFLASGEGTGL
ANVNPLEAIAGKCNVVCISEDNRNPQPSEEEVKTADFVFYRAFDVGKCSILDKMDDKVGG
LDGMCLSSLVKYVFNRKESQKASHVLKHASDQNGDNNAVEFQATTKESFGLKALNDLGTF
KASHLDGKIDVDAQSSLVRQDALQRETNVSRVNKETTKKANSASGEQNSHDVSRVAKAAG
KLSHIVGKSDVNVQTSPVRQDPLHGDANDSRVKQQSAMKGNPAPVQIVNSTTTTVVHKQN
TISEENARCKTKNEKDDKKVNKPPINLVEAGETGKSPKDLGVLDGRPSNRIKVNDSVILS
EDKGVNSVEKSTVCRNEKKVLGTSAVPSEERKKSVDSKDSAGGLDKNMKIRKDSAALDSR
PSKKANIDARKVQEDRDKSNMLGKRADNLGKLPKLSTGTSPKEVERTEGKSFEVTRRPVA
ESSKWFKAPDIIWHACRENCTTKMVQRTAFSSPYSGRALVAFKTRGVAERVTKKLADGCL
MVSNQRPLVASFVSLPKTEGNASSLAGHLCVDKLRLQLQREMREAVSTSHCSQPNTIEYE
MANEWRLLQARSDSWWNRLYKQQKEDLTKIASGL

Transcript Sequence

Gene sequence data has not been registered.